STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000034588Exonuclease domain-containing protein. (154 aa)    
Predicted Functional Partners:
LOC105937250
Exonuclease domain-containing protein.
  
 0.977
rexo1
REX1, RNA exonuclease 1 homolog.
  
 0.977
REXO5
RNA exonuclease 5.
  
 0.971
rexo4
REX4 homolog, 3'-5' exonuclease.
  
 0.843
pan2
Poly(A) specific ribonuclease subunit PAN2.
  
 0.751
isg20l2
Interferon stimulated exonuclease gene 20-like 2.
  
 0.749
LOC105926267
Interferon stimulated exonuclease gene 20 2-like protein.
  
 0.749
trnt1
tRNA nucleotidyl transferase, CCA-adding, 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
     
 0.722
trex1
DNA polymerase III PolC-type.
  
 0.688
exosc10
Exosome component 10.
   
 
 0.679
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.