STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105922112Si:ch211-1i11.3. (1096 aa)    
Predicted Functional Partners:
LOC105926483
Dual specificity mitogen-activated protein kinase kinase 3.
   
0.976
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.974
ENSFHEP00000011198
Protein kinase domain-containing protein.
   
0.970
LOC105933655
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.967
ern1
Endoplasmic reticulum to nucleus signaling 1.
   
0.966
LOC105934069
Endoplasmic reticulum to nucleus signaling 2.
   
0.966
dab2ip
Disabled-interacting protein.
    
 0.961
ENSFHEP00000025738
Uncharacterized protein.
    
 0.961
mapk10
Mitogen-activated protein kinase 10.
     
0.960
LOC105927955
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
0.958
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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