STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105929467Papilin b, proteoglycan-like sulfated glycoprotein. (850 aa)    
Predicted Functional Partners:
tmem160
Transmembrane protein 160.
      
 0.637
ENSFHEP00000000285
Uncharacterized protein.
      
 0.512
ENSFHEP00000001312
Ig-like domain-containing protein.
    
  0.466
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.466
hgfac
HGF activator.
    
 0.419
habp2
Uncharacterized protein.
    
  0.412
ngb
Neuroglobin; Belongs to the globin family.
     
 0.412
LOC105915258
Ig-like domain-containing protein.
    
  0.407
corin
Corin, serine peptidase.
    
  0.404
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.