STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462623Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b. (1385 aa)    
Predicted Functional Partners:
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.785
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.785
LOC103460558
Uncharacterized protein.
   
0.783
LOC103473962
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
0.783
LOC103468798
Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.
  
  
 
0.591
grin2b
Uncharacterized protein.
     
 
0.583
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.573
LOC103459892
Calcium/calmodulin-dependent protein kinase II alpha.
   
 0.549
LOC103469495
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2.
   
 0.549
camk2b
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.