STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462186UDENN FLCN/SMCR8-type domain-containing protein. (831 aa)    
Predicted Functional Partners:
c9orf72
Zgc:100846.
    
 
 0.936
wdr41
WD repeat domain 41.
    
 
 0.884
LOC103474790
Cyclin N-terminal domain containing 2; Belongs to the cyclin family.
    
 
 0.511
ccnb3
Cyclin B3; Belongs to the cyclin family.
    
 
 0.511
ccnb1
Cyclin B1; Belongs to the cyclin family.
    
 
 0.511
flcn
Folliculin.
      
 0.469
fnip1
Folliculin interacting protein 1.
    
 
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.