STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462017Uncharacterized protein. (701 aa)    
Predicted Functional Partners:
efcab7
EF-hand calcium binding domain 7.
   
 0.999
EVC2
EvC ciliary complex subunit 2.
     
 0.984
EVC
EvC ciliary complex subunit 1.
    
 0.980
ttc23
Tetratricopeptide repeat domain 23.
    
 
 0.919
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.668
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.646
ENSPREP00000004249
Uncharacterized protein.
    
   0.639
LOC103464711
Neuron navigator 1b.
    
 0.620
NAV1
Neuron navigator 1.
    
 0.620
ENSPREP00000003714
Uncharacterized protein.
    
 
 0.609
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.