STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dchs2Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.664
fjx1
Four-jointed box kinase 1.
   
 
 0.622
LOC103465321
Junction plakoglobin a.
    
 0.606
LOC103472282
Uncharacterized protein.
    
 0.606
fat4
FAT atypical cadherin 4.
   
 
 0.586
ENSPREP00000017735
Uncharacterized protein.
   
 
 0.586
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.575
ush1c
Usher syndrome 1C.
   
 
 0.527
ctnnd2
Catenin (cadherin-associated protein), delta 2b.
    
 0.512
LOC103463938
Catenin (cadherin-associated protein), delta 1.
    
 0.512
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]