STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fat1FAT atypical cadherin 1a. (4541 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 
 0.835
ENSPREP00000017735
Uncharacterized protein.
   
0.724
CDH7
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
0.715
LOC103462246
Si:ch211-186j3.6; Cadherins are calcium-dependent cell adhesion proteins.
   
0.715
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
0.715
cdh11
Cadherin 11, type 2, OB-cadherin (osteoblast); Cadherins are calcium-dependent cell adhesion proteins.
   
0.715
LOC103460778
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
0.715
LOC103474984
Dachsous cadherin-related 1a.
   
0.715
LOC103477590
Si:dkey-22o22.2; Cadherins are calcium-dependent cell adhesion proteins.
   
0.715
cdhr2
Uncharacterized protein.
   
0.715
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.