STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcm1Pericentriolar material 1. (2112 aa)    
Predicted Functional Partners:
bbs4
Bardet-Biedl syndrome 4.
   
 
 0.986
cep131
Centrosomal protein 131.
   
 0.984
ENSPREP00000030993
Centrosomal protein 72.
    
 
 0.982
ofd1
OFD1 centriole and centriolar satellite protein.
   
 
 0.972
Mib1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.948
fopnl
Fgfr1op N-terminal like.
    
 
 0.932
kiaa0753
Uncharacterized protein.
    
 
 0.905
cep290
Centrosomal protein 290.
   
 
 0.883
ENSPREP00000004463
Uncharacterized protein.
   
 
 0.883
ENSPREP00000010317
Uncharacterized protein.
   
 
 0.883
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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