STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcm1Pericentriolar material 1. (2112 aa)    
Predicted Functional Partners:
bbs4
Bardet-Biedl syndrome 4.
   
 
 0.876
ofd1
OFD1 centriole and centriolar satellite protein.
   
 
 0.817
ENSPREP00000030993
Centrosomal protein 72.
    
 
 0.790
plk4
Polo-like kinase 4 (Drosophila).
    
 0.759
cep131
Centrosomal protein 131.
    
 0.747
PLK1
Serine/threonine-protein kinase PLK.
    
 0.728
LOC103458731
Pericentrin.
   
 0.717
tsc1
TSC complex subunit 1b.
    
 
 0.687
plk3
Serine/threonine-protein kinase PLK.
    
 0.676
plk2
Serine/threonine-protein kinase PLK.
    
 0.676
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.