Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (756 aa)    
Predicted Functional Partners:
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.998
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
   
 0.995
Prpf4
WD_REPEATS_REGION domain-containing protein.
   
 0.995
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
   
 0.995
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
   
 0.991
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 0.989
prpf8
Pre-mRNA processing factor 8.
   
 0.988
UBL5
Ubiquitin like 5.
    
 0.983
lsm2
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.982
zmat2
Zinc finger, matrin-type 2.
    
 0.980
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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