Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458988Uncharacterized protein. (1012 aa)    
Predicted Functional Partners:
mff
Mitochondrial fission factor.
    
 0.514
thyn1
Thymocyte nuclear protein 1.
      
 0.486
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.467
ENSPREP00000001242
DIX domain-containing protein.
    
 0.419
ENSPREP00000001400
Uncharacterized protein.
    
 0.419
dvl1
Dishevelled segment polarity protein 1a.
    
 0.419
dvl2
Dishevelled segment polarity protein 2.
    
 0.419
LOC103479347
Dishevelled segment polarity protein 3a.
    
 0.419
ENSPREP00000020826
DIX domain-containing protein.
    
 0.419
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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