Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103480295GTP binding protein 1, like. (666 aa)    
Predicted Functional Partners:
ENSPREP00000029071
Coiled-coil domain containing 9.
   
  
 0.647
nudcd3
NudC domain containing 3.
      
 0.601
ubfd1
Ubiquitin family domain containing 1.
      
 0.600
oxnad1
Oxidoreductase NAD-binding domain containing 1.
      
 0.592
gtpbp3
GTP binding protein 3, mitochondrial.
      
 0.538
dut
Deoxyuridine triphosphatase.
   
  
 0.504
pelo
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.487
mrrf
Mitochondrial ribosome recycling factor.
      
 0.460
gpatch8
G patch domain containing 8.
      
 0.459
dcbld2
Discoidin, CUB and LCCL domain containing 2.
      
 0.453
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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