Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462536Uncharacterized protein. (321 aa)    
Predicted Functional Partners:
rps6kl1
Ribosomal protein S6 kinase-like 1.
      
 0.906
tcf25
Transcription factor 25 (basic helix-loop-helix).
      
 0.621
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
      
 0.587
LOC103482046
Cytochrome c oxidase assembly factor COX19.
      
 0.570
as3mt
Arsenite methyltransferase.
      
 0.565
myadml2
Myeloid-associated differentiation marker-like 2.
      
 0.532
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.523
cops3
COP9 signalosome subunit 3.
      
 0.480
ndnf
Neuron-derived neurotrophic factor.
      
 0.476
lmf1
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
      
 0.459
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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