Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nol11Nucleolar protein 11. (712 aa)    
Predicted Functional Partners:
utp4
UTP4 small subunit processome component.
   
 0.996
wdr43
WD repeat domain 43.
   
 0.994
utp15
UTP15 small subunit processome component.
   
 0.986
ENSPREP00000008920
Uncharacterized protein.
   
 0.977
utp20
UTP20 small subunit processome component.
   
 
 0.961
ENSPREP00000030222
Nucleolar protein 7.
    
 
 0.956
Heatr1
BP28CT domain-containing protein.
   
 0.948
ENSPREP00000024047
Uncharacterized protein.
   
 0.948
emg1
EMG1 N1-specific pseudouridine methyltransferase.
   
 
 0.932
pdcd11
Programmed cell death 11.
   
 
 0.921
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.