Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462404Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
ENSPREP00000002440
Ig-like domain-containing protein.
    
  0.905
ENSPREP00000006823
IG domain-containing protein.
     
  0.900
ENSPREP00000022665
Uncharacterized protein.
     
 
0.900
LOC103478905
Polymeric immunoglobulin receptor.
     
 
0.900
tyrobp
Uncharacterized protein.
   
 0.569
piga
Phosphatidylinositol glycan anchor biosynthesis, class A.
      
 0.517
ptprc
Protein tyrosine phosphatase receptor type C.
   
 0.512
tnn
Tenascin N.
    
 0.492
tnr
Tenascin R (restrictin, janusin).
    
 0.492
LOC103469607
Tenascin C.
    
 0.492
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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