cc2d1a protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

cc2d1a

Uncharacterized protein. (990 aa)

Predicted Functional Partners:

LOC103468028

0.859

chmp4c

0.859

LOC103464227

0.859

tm9sf1

0.762

chmp7

0.755

chmp2a

0.740

chmp3

0.735

ist1

0.733

phgdh

0.657

LOC103468818

0.654

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103464227	LOC103468028	ENSPREP00000030757	ENSPREP00000001515	Uncharacterized protein.	Charged multivesicular body protein 4Bb.	0.900
LOC103464227	LOC103468818	ENSPREP00000030757	ENSPREP00000004826	Uncharacterized protein.	Charged multivesicular body protein 6a.	0.931
LOC103464227	cc2d1a	ENSPREP00000030757	ENSPREP00000000565	Uncharacterized protein.	Uncharacterized protein.	0.859
LOC103464227	chmp2a	ENSPREP00000030757	ENSPREP00000019506	Uncharacterized protein.	Charged multivesicular body protein 2A.	0.959
LOC103464227	chmp3	ENSPREP00000030757	ENSPREP00000021883	Uncharacterized protein.	Charged multivesicular body protein 3.	0.953
LOC103464227	chmp4c	ENSPREP00000030757	ENSPREP00000012293	Uncharacterized protein.	Charged multivesicular body protein 4C.	0.902
LOC103464227	chmp7	ENSPREP00000030757	ENSPREP00000001098	Uncharacterized protein.	Charged multivesicular body protein 7.	0.987
LOC103464227	ist1	ENSPREP00000030757	ENSPREP00000033429	Uncharacterized protein.	IST1 factor associated with ESCRT-III.	0.929
LOC103468028	LOC103464227	ENSPREP00000001515	ENSPREP00000030757	Charged multivesicular body protein 4Bb.	Uncharacterized protein.	0.900
LOC103468028	LOC103468818	ENSPREP00000001515	ENSPREP00000004826	Charged multivesicular body protein 4Bb.	Charged multivesicular body protein 6a.	0.931
LOC103468028	cc2d1a	ENSPREP00000001515	ENSPREP00000000565	Charged multivesicular body protein 4Bb.	Uncharacterized protein.	0.859
LOC103468028	chmp2a	ENSPREP00000001515	ENSPREP00000019506	Charged multivesicular body protein 4Bb.	Charged multivesicular body protein 2A.	0.959
LOC103468028	chmp3	ENSPREP00000001515	ENSPREP00000021883	Charged multivesicular body protein 4Bb.	Charged multivesicular body protein 3.	0.953
LOC103468028	chmp4c	ENSPREP00000001515	ENSPREP00000012293	Charged multivesicular body protein 4Bb.	Charged multivesicular body protein 4C.	0.901
LOC103468028	chmp7	ENSPREP00000001515	ENSPREP00000001098	Charged multivesicular body protein 4Bb.	Charged multivesicular body protein 7.	0.987
LOC103468028	ist1	ENSPREP00000001515	ENSPREP00000033429	Charged multivesicular body protein 4Bb.	IST1 factor associated with ESCRT-III.	0.929
LOC103468028	tm9sf1	ENSPREP00000001515	ENSPREP00000026179	Charged multivesicular body protein 4Bb.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.715
LOC103468818	LOC103464227	ENSPREP00000004826	ENSPREP00000030757	Charged multivesicular body protein 6a.	Uncharacterized protein.	0.931
LOC103468818	LOC103468028	ENSPREP00000004826	ENSPREP00000001515	Charged multivesicular body protein 6a.	Charged multivesicular body protein 4Bb.	0.931
LOC103468818	cc2d1a	ENSPREP00000004826	ENSPREP00000000565	Charged multivesicular body protein 6a.	Uncharacterized protein.	0.654