Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103464936BAF chromatin remodeling complex subunit BCL11A b. (810 aa)    
Predicted Functional Partners:
actl6a
Actin-like 6A; Belongs to the actin family.
    
 0.711
LOC103465373
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
    
 0.631
smarcc1
Uncharacterized protein.
    
 0.631
LOC103470731
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
    
  0.629
smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
    
  0.629
LOC103468256
Uncharacterized protein.
    
  0.629
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
     
 0.628
ENSPREP00000011375
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
     
 0.628
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
   
 
 0.608
LOC103478439
AT rich interactive domain 1Aa (SWI-like).
    
  0.596
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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