Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ntan1Uncharacterized protein. (307 aa)    
Predicted Functional Partners:
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
 
    
 0.782
pdxdc1
Pyridoxal-dependent decarboxylase domain containing 1.
      
 0.758
Chst2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.758
tmem82
Transmembrane protein 82.
      
 0.758
ENSPREP00000027213
Uncharacterized protein.
      
 0.668
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
    
 
 0.656
wdyhv1
WDYHV motif containing 1.
    
 
 0.625
snph
Syntaphilin b.
      
 0.616
cep41
Centrosomal protein 41.
      
 0.598
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.595
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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