Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103464681DEAD-box helicase 17; Belongs to the DEAD box helicase family. (651 aa)    
Predicted Functional Partners:
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.969
DHX15
DEAH-box helicase 15.
   
 0.901
LOC103480693
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.901
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.896
sf1
Splicing factor 1.
   
 0.866
drosha
Drosha ribonuclease III.
   
 
 0.852
dkc1
Dyskeratosis congenita 1, dyskerin.
  
 
 0.849
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
  
0.849
LOC103469127
Aly/REF export factor.
   
 0.834
dhx35
DEAH-box helicase 35.
   
 0.821
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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