Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457571Si:ch211-203k16.3. (433 aa)    
Predicted Functional Partners:
fgg
Fibrinogen gamma chain.
   
 
0.581
fga
Fibrinogen alpha chain.
   
 
0.574
fgb
Fibrinogen beta chain.
   
 
0.563
ENSPREP00000010336
Fibrinogen C-terminal domain-containing protein.
   
 
 
0.554
angptl1
Angiopoietin-like 1a.
   
 
 
0.548
LOC103459605
Fibrinogen C-terminal domain-containing protein.
   
 
 
0.548
angptl5
Angiopoietin-like 5.
   
 
 
0.548
LOC103475512
Si:ch211-287a12.9.
   
 
 
0.543
fgl1
Fibrinogen C-terminal domain-containing protein.
     
 
0.540
LOC103463345
Fibrinogen C-terminal domain-containing protein.
     
 
0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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