Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl36Kelch-like family member 36. (618 aa)    
Predicted Functional Partners:
bbs9
Bardet-Biedl syndrome 9.
    
 0.588
bbs4
Bardet-Biedl syndrome 4.
    
 0.580
bbs1
Bardet-Biedl syndrome 1.
    
 0.570
bbs7
Bardet-Biedl syndrome 7.
   
 0.560
ttc8
Tetratricopeptide repeat domain 8.
    
 0.542
ubxn7
UBX domain protein 7.
    
  0.509
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.490
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.440
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.440
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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