Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB12Ankyrin repeat and SOCS box containing 12. (301 aa)    
Predicted Functional Partners:
asb16
Ankyrin repeat and SOCS box containing 16.
  
 
0.799
lrrc20
Leucine rich repeat containing 20.
   
 0.707
LOC103464766
Leucine rich repeat containing 38b.
    
 0.654
lrrc14b
Leucine rich repeat containing 14B.
   
  
 0.647
osbpl6
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.614
osbpl7
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.614
osbpl11
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.607
pwwp2b
PWWP domain containing 2B.
      
 0.604
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.579
ppef1
Serine/threonine-protein phosphatase with EF-hands.
    
 0.575
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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