Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ankrd39Ankyrin repeat domain 39. (198 aa)    
Predicted Functional Partners:
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.934
gnrh1
Uncharacterized protein.
      
 0.749
lgi3
Leucine-rich repeat LGI family, member 3.
    
 0.702
LOC103469672
Fibroblast growth factor receptor.
     
 0.664
LOC103469676
Neuropeptide Y receptor Y8b; Belongs to the G-protein coupled receptor 1 family.
     
 0.651
bard1
BRCA1 associated RING domain 1.
  
 
 
0.651
LOC103473157
Fibroblast growth factor receptor.
     
 0.635
LOC103473156
Actin related protein 1, centractin.
    
 0.628
brca1
Uncharacterized protein.
    
  0.622
anapc10
Anaphase promoting complex subunit 10.
    
  0.613
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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