Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103464222Cholinergic receptor, nicotinic, beta polypeptide 3a. (594 aa)    
Predicted Functional Partners:
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
   
 0.839
LOC103467111
Uncharacterized protein.
   
 0.832
LYPD6
LY6/PLAUR domain containing 6.
    
 0.683
LOC103462695
Cholinergic receptor, nicotinic, beta 4 (neuronal).
   
 0.682
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
 0.642
LOC103464230
Uncharacterized protein.
   
 0.626
ENSPREP00000024963
Uncharacterized protein.
   
 0.626
LOC103464242
Cholinergic receptor, nicotinic, beta 5a.
   
 0.611
LOC103462694
Cholinergic receptor, nicotinic, alpha 3.
   
 0.611
chrnd
Cholinergic receptor, nicotinic, delta (muscle).
   
 0.611
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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