Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf142Zinc finger protein 142. (1459 aa)    
Predicted Functional Partners:
ENSPREP00000033818
Protein kinase domain-containing protein.
   
 0.606
mrps16
Mitochondrial ribosomal protein S16.
    
 0.575
slc38a11
Solute carrier family 38 member 11.
    
 0.514
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.492
ttl
Tubulin tyrosine ligase.
      
 0.472
ttll7
Tubulin tyrosine ligase-like family, member 7.
      
 0.467
setd3
Protein-histidine N-methyltransferase.
    
 0.464
ttc21b
Tetratricopeptide repeat domain 21B.
     
 0.432
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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