Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480175Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
CPA1
Carboxypeptidase A1.
      
 0.668
LOC103467989
Elastase 2; Belongs to the peptidase S1 family.
      
 0.668
ACTC1
Zgc:86709.
      
 0.661
LOC103473309
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.
      
 0.603
LOC103457597
Jun dimerization protein 2.
      
 0.599
LOC103463110
Kininogen 1.
      
 0.535
LOC103465673
Carboxypeptidase A1.
      
 0.532
mybpc3
Myosin binding protein C, cardiac.
      
 0.530
fabp2
Fatty acid binding protein 2, intestinal; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.522
ctrl
Zgc:171592; Belongs to the peptidase S1 family.
      
 0.520
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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