STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474654Tetratricopeptide repeat domain 9B. (255 aa)    
Predicted Functional Partners:
LOC103475402
Serine/threonine kinase 10.
      
 0.726
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.650
pin4
Peptidyl-prolyl cis-trans isomerase.
   
 
 0.630
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
      
 0.604
rnf7
Ring finger protein 7.
   
  
 0.586
fbxw5
F-box and WD repeat domain containing 5.
   
 
 0.583
ENSPREP00000028517
ANK_REP_REGION domain-containing protein.
   
 0.580
trap1
TNF receptor-associated protein 1.
   
 0.560
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.560
LOC103457917
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.560
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (14%) [HD]