STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lgi3Leucine-rich repeat LGI family, member 3. (549 aa)    
Predicted Functional Partners:
adam23
ADAM metallopeptidase domain 23.
     
 0.904
adam22
ADAM metallopeptidase domain 22.
     
 0.788
fgf17
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.766
ADAM11
ADAM metallopeptidase domain 11.
     
 0.732
LOC103481264
Uncharacterized protein.
     
 0.732
ankrd39
Ankyrin repeat domain 39.
    
 0.702
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.699
gnrh1
Uncharacterized protein.
     
 0.667
LOC103473156
Actin related protein 1, centractin.
    
 
 0.613
ENSPREP00000006860
Mitochondrial ribosomal protein S10.
   
 
 0.587
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.