STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgi3Leucine-rich repeat LGI family, member 3. (549 aa)    
Predicted Functional Partners:
adam23
ADAM metallopeptidase domain 23.
     
 0.795
adam22
ADAM metallopeptidase domain 22.
     
 0.790
LOC103481264
Uncharacterized protein.
     
 0.632
ADAM11
ADAM metallopeptidase domain 11.
     
 0.574
LOC103470529
Sorbin and SH3 domain containing 3.
     
 0.569
chmp7
Charged multivesicular body protein 7.
      
 0.566
fgf17
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.544
LOC103464693
Tetraspanin.
   
 
 0.534
perp
P53 apoptosis effector related to pmp22.
      
 0.504
LOC103459309
Ninjurin 2.
   
  
 0.493
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.