STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stbd1CBM20 domain-containing protein. (558 aa)    
Predicted Functional Partners:
epm2a
EPM2A glucan phosphatase, laforin.
    
 
 0.706
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
    
 
 0.661
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
    
 
 0.567
gyg1
Glycogenin 1a.
   
 
 0.535
gyg2
Glycogenin 2.
   
 
 0.535
LOC103456549
Glycogenin 1b.
   
 
 0.535
gys2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.492
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.492
gabarapl2
GABA(A) receptor-associated protein like 2.
    
 
 0.421
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.421
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.