STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sclt1Sodium channel and clathrin linker 1. (680 aa)    
Predicted Functional Partners:
cep83
Centrosomal protein 83.
   
 0.680
kiz
Kizuna centrosomal protein.
    
  0.673
cep89
Centrosomal protein 89.
     
0.651
CEP164
Centrosomal protein 164.
   
 0.647
fbf1
Uncharacterized protein.
    
 0.645
c2cd3
C2 domain containing 3 centriole elongation regulator.
    
 0.568
CEP128
Centrosomal protein 128.
    
 0.566
lrrc45
Leucine rich repeat containing 45.
    
 
 0.561
ENSPREP00000025909
TBC1 domain family, member 32.
      
 0.549
cep19
Centrosomal protein 19.
      
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.