STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (302 aa)    
Predicted Functional Partners:
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.654
nppa
Natriuretic peptide A.
   
 
 0.621
cops2
COP9 signalosome subunit 2.
    
 0.611
acaa2
Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.602
ENSPREP00000031844
ANK_REP_REGION domain-containing protein.
  
 
 0.556
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
 
  0.552
leng8
Leukocyte receptor cluster (LRC) member 8.
      
 0.515
Myoz3
Uncharacterized protein.
    
 0.513
LOC103481867
Ankyrin repeat and SOCS box containing 3.
  
     0.508
tcap
Titin-cap (telethonin).
    
 
 0.505
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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