gpr156 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

gpr156

G protein-coupled receptor 156. (818 aa)

Predicted Functional Partners:

GABBR1

0.906

gabbr2

0.906

gpsm2

0.746

gpr18

0.670

gtf2a1

0.603

LOC103463079

0.584

stxbp6

0.581

GNG4

0.576

gng2

0.576

gpr158

0.570

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GABBR1	GNG4	ENSPREP00000005076	ENSPREP00000012025	Gamma-aminobutyric acid (GABA) B receptor, 1a.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.863
GABBR1	LOC103463079	ENSPREP00000005076	ENSPREP00000031548	Gamma-aminobutyric acid (GABA) B receptor, 1a.	Uncharacterized protein.	0.471
GABBR1	gabbr2	ENSPREP00000005076	ENSPREP00000006445	Gamma-aminobutyric acid (GABA) B receptor, 1a.	Gamma-aminobutyric acid (GABA) B receptor, 2.	0.900
GABBR1	gng2	ENSPREP00000005076	ENSPREP00000025516	Gamma-aminobutyric acid (GABA) B receptor, 1a.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.863
GABBR1	gpr156	ENSPREP00000005076	ENSPREP00000001062	Gamma-aminobutyric acid (GABA) B receptor, 1a.	G protein-coupled receptor 156.	0.906
GABBR1	gpsm2	ENSPREP00000005076	ENSPREP00000023403	Gamma-aminobutyric acid (GABA) B receptor, 1a.	Uncharacterized protein.	0.471
GNG4	GABBR1	ENSPREP00000012025	ENSPREP00000005076	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Gamma-aminobutyric acid (GABA) B receptor, 1a.	0.863
GNG4	gabbr2	ENSPREP00000012025	ENSPREP00000006445	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Gamma-aminobutyric acid (GABA) B receptor, 2.	0.863
GNG4	gpr156	ENSPREP00000012025	ENSPREP00000001062	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	G protein-coupled receptor 156.	0.576
LOC103463079	GABBR1	ENSPREP00000031548	ENSPREP00000005076	Uncharacterized protein.	Gamma-aminobutyric acid (GABA) B receptor, 1a.	0.471
LOC103463079	gabbr2	ENSPREP00000031548	ENSPREP00000006445	Uncharacterized protein.	Gamma-aminobutyric acid (GABA) B receptor, 2.	0.471
LOC103463079	gpr156	ENSPREP00000031548	ENSPREP00000001062	Uncharacterized protein.	G protein-coupled receptor 156.	0.584
gabbr2	GABBR1	ENSPREP00000006445	ENSPREP00000005076	Gamma-aminobutyric acid (GABA) B receptor, 2.	Gamma-aminobutyric acid (GABA) B receptor, 1a.	0.900
gabbr2	GNG4	ENSPREP00000006445	ENSPREP00000012025	Gamma-aminobutyric acid (GABA) B receptor, 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.863
gabbr2	LOC103463079	ENSPREP00000006445	ENSPREP00000031548	Gamma-aminobutyric acid (GABA) B receptor, 2.	Uncharacterized protein.	0.471
gabbr2	gng2	ENSPREP00000006445	ENSPREP00000025516	Gamma-aminobutyric acid (GABA) B receptor, 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.863
gabbr2	gpr156	ENSPREP00000006445	ENSPREP00000001062	Gamma-aminobutyric acid (GABA) B receptor, 2.	G protein-coupled receptor 156.	0.906
gabbr2	gpsm2	ENSPREP00000006445	ENSPREP00000023403	Gamma-aminobutyric acid (GABA) B receptor, 2.	Uncharacterized protein.	0.471
gng2	GABBR1	ENSPREP00000025516	ENSPREP00000005076	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Gamma-aminobutyric acid (GABA) B receptor, 1a.	0.863
gng2	gabbr2	ENSPREP00000025516	ENSPREP00000006445	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Gamma-aminobutyric acid (GABA) B receptor, 2.	0.863