STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478590Speriolin_C domain-containing protein. (222 aa)    
Predicted Functional Partners:
LOC103462945
Forkhead box R1.
      
 0.505
zar1
Zygote arrest 1.
      
 0.505
spag6
Sperm associated antigen 6.
      
 0.473
KRTCAP3
Keratinocyte associated protein 3.
      
 0.470
cep76
Centrosomal protein 76.
      
 0.470
LOC103474903
Tektin 1.
      
 0.419
dmrt2
Doublesex and mab-3 related transcription factor 2a.
      
 0.407
spata4
Spermatogenesis associated 4.
      
 0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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