STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ska3Spindle and kinetochore associated complex subunit 3. (523 aa)    
Predicted Functional Partners:
ska1
Uncharacterized protein.
   
 
 0.972
Ska2
SKA2 domain-containing protein.
   
 
 0.963
ttk
Ttk protein kinase.
   
  
 0.853
exo1
Exonuclease 1.
   
  
 0.807
ndc80
NDC80 kinetochore complex component.
   
  
 0.777
nuf2
UF2 component of NDC80 kinetochore complex.
   
  
 0.773
ENSPREP00000027387
PP1-binding domain-containing protein.
   
  
 0.771
LOC103460459
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.738
ncaph
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
  
 0.713
cenpn
Centromere protein N.
   
  
 0.709
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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