STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001090Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (180 aa)    
Predicted Functional Partners:
lamp2
Lysosomal-associated membrane protein 2.
   
 0.954
eea1
Early endosome antigen 1.
      
 0.924
LOC103466662
Tetraspanin.
   
 
 0.871
CD9
Tetraspanin.
   
 
 0.871
LOC103466916
Syndecan binding protein (syntenin) 2.
   
 0.857
lamp1
Lysosomal associated membrane protein 1a.
   
 0.849
LOC103466144
Zgc:123278.
    
 
 0.727
tsg101
Tumor susceptibility 101a.
    
 
 0.727
ENSPREP00000016317
Uncharacterized protein.
     
 0.718
sele
Selectin E.
     
 0.718
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.