STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001090Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (180 aa)    
Predicted Functional Partners:
lamp2
Lysosomal-associated membrane protein 2.
    
 0.875
lamp1
Lysosomal associated membrane protein 1a.
   
 0.707
eea1
Early endosome antigen 1.
      
 0.647
LOC103480138
Lysosomal associated membrane protein 1.
   
 0.603
LOC103466662
Tetraspanin.
   
 
 0.602
CD9
Tetraspanin.
   
 
 0.602
LOC103466916
Syndecan binding protein (syntenin) 2.
   
 0.600
ENSPREP00000001350
Uncharacterized protein.
     
 0.584
rab27a
RAB27A, member RAS oncogene family.
     
 0.584
cd81
Tetraspanin.
    
 
 0.557
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.