STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
malsu1Si:zfos-1192g2.3. (235 aa)    
Predicted Functional Partners:
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.997
mrpl32
Mitochondrial ribosomal protein L32.
  
 0.985
mrpl42
Mitochondrial ribosomal protein L42.
   
  0.982
ENSPREP00000014653
Mitochondrial ribosomal protein L39.
  
 0.981
mrpl28
Mitochondrial ribosomal protein L28.
   
  0.981
mrpl19
Mitochondrial ribosomal protein L19.
   
 0.979
ENSPREP00000005627
Mitochondrial ribosomal protein L14.
   
 0.977
mrpl9
Mitochondrial ribosomal protein L9.
  
 0.977
mrpl4
Mitochondrial ribosomal protein L4.
   
 0.977
mrpl47
Mitochondrial ribosomal protein L47.
   
  0.976
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.