STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malsu1Si:zfos-1192g2.3. (235 aa)    
Predicted Functional Partners:
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.993
Mrpl21
Mitochondrial ribosomal protein L21.
  
   0.985
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.983
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.983
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.979
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.978
mrm3
SpoU_sub_bind domain-containing protein.
   
 
 0.976
mrpl47
Mitochondrial ribosomal protein L47.
   
   0.972
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.971
mrpl24
Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.970
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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