STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472875D site albumin promoter binding protein a. (271 aa)    
Predicted Functional Partners:
LOC103470443
Cytochrome c oxidase subunit 7C.
   
 0.663
dbp
D site albumin promoter binding protein b.
   
   0.646
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.601
LOC103466419
Uncharacterized protein.
   
 0.601
LOC103468946
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.577
LOC103469699
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.577
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
  0.562
LOC103464609
BZIP domain-containing protein.
    
 
 0.527
LOC103464602
Nuclear factor, interleukin 3 regulated, member 5.
    
 
 0.527
Nfil3
Nuclear factor, interleukin 3 regulated.
    
 
 0.527
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.