STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103470355Solute carrier family 2 member 11b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (511 aa)    
Predicted Functional Partners:
kntc1
Kinetochore associated 1.
   
  
 0.661
ENSPREP00000031558
TRAF-type zinc finger domain containing 1.
    
 0.641
chek2
Checkpoint kinase 2.
   
  
 0.637
Tspan10
Tetraspanin 10; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.570
dct
Dopachrome tautomerase.
   
 
 0.544
kirrel2
Kirre like nephrin family adhesion molecule 3, like.
   
 
 0.541
pmel
Premelanosome protein a.
   
  
 0.532
slc45a2
Solute carrier family 45 member 2.
   
  
 0.507
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.507
ca10
Carbonic anhydrase Xa; Belongs to the alpha-carbonic anhydrase family.
      
 0.476
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.