STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab33bRAB33B, member RAS oncogene family a. (236 aa)    
Predicted Functional Partners:
LOC103463837
Uncharacterized protein.
  
  
 
0.903
LOC103479386
Zgc:101559.
  
  
 
0.902
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.870
ENSPREP00000002755
ATG16 autophagy related 16-like 2 (S. cerevisiae).
    
 
 0.869
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
    
 
 0.869
tbc1d25
TBC1 domain family, member 25.
     
 0.797
trappc2
Trafficking protein particle complex 2.
    
 0.750
LOC103471023
RAB33A, member RAS oncogene family.
  
 
 
0.747
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.737
trappc6a
Trafficking protein particle complex 6b-like.
   
 0.732
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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