STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d9TBC1 domain family, member 9 (with GRAM domain). (1276 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
  0.943
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 
  0.641
snapin
SNAP associated protein.
     
 0.507
ap5m1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
     
 0.504
igf2r
Insulin-like growth factor 2 receptor.
   
 
  0.500
LOC103458072
Yip1 domain-containing protein.
   
 
  0.448
LOC103476383
AP complex subunit beta.
   
 
  0.448
ap1b1
AP complex subunit beta.
   
 
  0.448
hip1
Huntingtin interacting protein 1.
   
 
  0.441
LOC103470262
Huntingtin interacting protein 1 related b.
   
 
  0.441
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.