STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arl2bpADP-ribosylation factor-like 2 binding protein. (179 aa)    
Predicted Functional Partners:
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
   
 0.998
cfap20
Cilia and flagella associated protein 20.
    
 
 0.962
clg16h8orf37
Uncharacterized protein.
      
 0.787
LOC103481790
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.786
LOC103461390
Uncharacterized protein.
    
 
 0.786
LOC103473803
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.786
gpatch3
G patch domain containing 3.
      
 0.758
rspry1
Ring finger and SPRY domain containing 1.
      
 0.727
efcab1
Uncharacterized protein.
      
 0.716
ttc8
Tetratricopeptide repeat domain 8.
      
 0.705
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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