STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479517Nectin cell adhesion molecule 4b. (534 aa)    
Predicted Functional Partners:
PARD3
Par-3 family cell polarity regulator.
     
  0.900
pard3
Par-3 family cell polarity regulator alpha, b.
     
  0.900
nectin1
Nectin cell adhesion molecule 1b.
     
 
0.855
LOC103474127
Uncharacterized protein.
     
 
0.716
ENSPREP00000031411
Nectin cell adhesion molecule 3b.
     
 
0.716
LOC103472957
PVR cell adhesion molecule related 2 like.
     
 
0.650
nectin2
Si:ch73-22o12.1.
     
 
0.650
LOC103475472
Nectin cell adhesion molecule 1a.
     
 
0.650
ccdc18
Coiled-coil domain containing 18.
  
     0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.