STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468022Uncharacterized protein. (916 aa)    
Predicted Functional Partners:
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.942
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.922
lin37
Lin-37 DREAM MuvB core complex component.
   
 0.819
foxm1
Forkhead box M1.
   
 0.793
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.750
e2f1
E2F transcription factor 1.
   
 0.678
rbbp4
Retinoblastoma binding protein 4.
   
 0.627
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.627
ENSPREP00000011364
Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.590
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.589
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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