STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnpepl1Arginyl aminopeptidase like 1. (714 aa)    
Predicted Functional Partners:
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
   
  
 0.898
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
  
 
 0.781
pde5a
Phosphodiesterase.
      
 0.762
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
   
  
 0.722
metap1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
 
 0.607
jpt2
Jupiter microtubule associated homolog 2.
    
 
 0.592
Suox
Sulfite oxidase.
      
 0.587
morn3
MORN repeat containing 3.
      
 0.586
fam98b
Family with sequence similarity 98 member B.
    
 0.556
LOC103458609
Glutaminyl-peptide cyclotransferase.
     
 0.533
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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