STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Clg4h19orf24Si:ch211-262i1.6. (150 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
      
 0.598
rbis
Si:ch211-282b22.1.
      
 0.596
lrrcc1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.596
LOC103463687
Midnolin.
      
 0.593
tmem259
Transmembrane protein 259.
      
 0.580
POLR2E
RNA polymerase II subunit E.
      
 0.580
ncapd3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.543
dazap1
DAZ associated protein 1.
      
 0.526
grin3b
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
     
 0.501
thyn1
Thymocyte nuclear protein 1.
      
 0.498
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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