STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001241G_PROTEIN_RECEP_F1_2 domain-containing protein. (153 aa)    
Predicted Functional Partners:
LOC103475296
Somatostatin.
   
 0.778
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.600
bbs7
Bardet-Biedl syndrome 7.
     
 0.587
bbs1
Bardet-Biedl syndrome 1.
     
 0.581
bbs4
Bardet-Biedl syndrome 4.
     
 0.569
bbs2
Bardet-Biedl syndrome 2.
     
 0.562
bbs9
Bardet-Biedl syndrome 9.
     
 0.554
lztfl1
Leucine zipper transcription factor-like 1.
     
 0.529
ttc8
Tetratricopeptide repeat domain 8.
     
 0.500
CENPS
Centromere protein S.
    
 0.487
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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