STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clg2h2orf88Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
slc25a20
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
    
 
 0.627
akap11
A kinase (PRKA) anchor protein 11.
      
 0.602
akap7
Uncharacterized protein.
      
 0.599
LOC103479000
P2Y receptor family member 8; Belongs to the G-protein coupled receptor 1 family.
      
 0.597
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
    
 
 0.540
prkar1b
Protein kinase, cAMP-dependent, regulatory, type I, beta.
    
 
 0.540
prkar2a
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
    
 
 0.540
prkar1a
Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.
    
 
 0.540
akap10
A kinase (PRKA) anchor protein 10.
      
 0.532
scaper
S-phase cyclin A-associated protein in the ER.
      
 0.501
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.