STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myocMyocilin. (482 aa)    
Predicted Functional Partners:
wdr36
WD repeat domain 36.
      
 0.657
optn
Optineurin.
      
 0.531
MYL2
Myosin light chain 2.
   
 
 0.516
LOC103469530
Myosin, light chain 2a, regulatory, cardiac, slow.
   
 
 0.516
LOC103477101
Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.503
ENSPREP00000013251
Microfibril associated protein 5.
   
  
 0.465
LOC103469374
Reprimo-like.
      
 0.444
telo2
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.441
Marveld1
MARVEL domain containing 1.
      
 0.441
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.429
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.