STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001255Uncharacterized protein. (681 aa)    
Predicted Functional Partners:
rb1cc1
RB1-inducible coiled-coil 1.
   
 0.954
Unc79
Uncharacterized protein.
    
 0.768
sec62
SEC62 homolog, preprotein translocation factor.
   
 
 0.663
ENSPREP00000005380
Uncharacterized protein.
      
 0.560
LOC103471655
Atlastin 3.
      
 0.560
tex264
Testis expressed 264, ER-phagy receptor a.
      
 0.560
retreg1
Reticulophagy regulator 1.
    
 
 0.553
LOC103461037
RAN binding protein 2.
    
 0.533
rbbp5
Retinoblastoma binding protein 5.
    
 0.465
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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