STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zswim5Zinc finger, SWIM-type containing 5. (1160 aa)    
Predicted Functional Partners:
cul2
Cullin 2; Belongs to the cullin family.
     
 0.633
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.627
appbp2
Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.
   
 
  0.560
zswim8
Zinc finger, SWIM-type containing 8.
     
0.549
zer1
Zyg-11 related, cell cycle regulator.
     
 0.545
ZSWIM6
Zinc finger SWIM-type containing 6.
  
  
 
0.545
LOC103473262
Zinc finger, SWIM-type containing 6.
  
  
 
0.545
zyg11b
Zyg-11 homolog (C. elegans).
     
  0.540
LOC103478992
Uncharacterized protein.
     
  0.540
Rgcc
Regulator of cell cycle.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.